Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator / antitoxin higa | SAMN06296052_105150 | Not Available | Positive | 1698219 - 1698692 | 18216.9 |
| hypothetical protein | SAMN06296052_105151 | Not Available | Positive | 1698893 - 1699174 | 11234.7 |
| predicted atp-dependent endonuclease of the old family, contains p-loop atpase and toprim domains | SAMN06296052_105152 | Not Available | Positive | 1700435 - 1702486 | 79212.2 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN06296052_105153 | Not Available | Positive | 1702465 - 1704393 | 73891.4 |
| fic/doc family protein | SAMN06296052_105154 | Not Available | Positive | 1704502 - 1704867 | 13592.1 |
| resolvase, n terminal domain | SAMN06296052_105155 | Not Available | Negative | 1705082 - 1705837 | 28678.3 |
| protein of unknown function | SAMN06296052_105156 | Not Available | Positive | 1706063 - 1707199 | 43290.6 |
| addiction module antidote protein, higa family | SAMN06296052_105157 | Not Available | Negative | 1707552 - 1707848 | 11024.2 |
| proteic killer suppression protein | SAMN06296052_105158 | Not Available | Negative | 1707863 - 1708141 | 10368.4 |
| transposase | SAMN06296052_105159 | Not Available | Positive | 1708673 - 1709635 | 35476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
