Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_105140 | Not Available | Negative | 1689384 - 1690088 | 26452.2 |
| dna binding domain-containing protein, excisionase family | SAMN06296052_105141 | Not Available | Negative | 1690081 - 1690266 | 6916.46 |
| hypothetical protein | SAMN06296052_105142 | Not Available | Negative | 1690271 - 1690588 | 11810.2 |
| chromosome partitioning protein | SAMN06296052_105143 | Not Available | Negative | 1690652 - 1691398 | 27206.1 |
| toprim-like | SAMN06296052_105144 | Not Available | Negative | 1691445 - 1693904 | 92062.1 |
| protein of unknown function | SAMN06296052_105145 | Not Available | Negative | 1693933 - 1694166 | 8887.57 |
| thrombospondin type 3 repeat-containing protein | SAMN06296052_105146 | Not Available | Positive | 1694414 - 1696087 | 62116.6 |
| hypothetical protein | SAMN06296052_105147 | Not Available | Positive | 1696288 - 1696455 | 6049.35 |
| dna polymerase v | SAMN06296052_105148 | Not Available | Negative | 1696457 - 1697728 | 47512.4 |
| mrna interferase higb | SAMN06296052_105149 | Not Available | Positive | 1697886 - 1698179 | 11392.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
