Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10550 | Not Available | Positive | 1604267 - 1604704 | 16578.8 |
| hypothetical protein | SAMN06296052_10551 | Not Available | Positive | 1604942 - 1605574 | 23442.9 |
| zinc transporter, zip family | SAMN06296052_10552 | Not Available | Positive | 1605612 - 1606352 | 25757.8 |
| ribulose-5-phosphate 3-epimerase | SAMN06296052_10553 | Not Available | Negative | 1606407 - 1607084 | 24446.6 |
| hypothetical protein | SAMN06296052_10554 | Not Available | Negative | 1607155 - 1607619 | 17123.6 |
| hypothetical protein | SAMN06296052_10555 | Not Available | Positive | 1607996 - 1608382 | 14304.2 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN06296052_10556 | Not Available | Positive | 1608488 - 1612312 | 139983.0 |
| outer membrane protein tolc | SAMN06296052_10557 | Not Available | Positive | 1612309 - 1613595 | 49829.5 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN06296052_10558 | Not Available | Positive | 1613576 - 1615396 | 66366.7 |
| protein of unknown function | SAMN06296052_10559 | Not Available | Positive | 1615425 - 1616024 | 22217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
