Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l6p | SAMN06296052_10155 | Not Available | Positive | 46081 - 46635 | 20022.5 |
| lsu ribosomal protein l18p | SAMN06296052_10156 | Not Available | Positive | 46644 - 46991 | 12543.1 |
| ssu ribosomal protein s5p | SAMN06296052_10157 | Not Available | Positive | 46998 - 47516 | 18028.1 |
| lsu ribosomal protein l30p | SAMN06296052_10158 | Not Available | Positive | 47522 - 47704 | 6681.33 |
| lsu ribosomal protein l15p | SAMN06296052_10159 | Not Available | Positive | 47704 - 48150 | 15953.1 |
| protein translocase subunit secy/sec61 alpha | SAMN06296052_10160 | Not Available | Positive | 48162 - 49478 | 47967.0 |
| methionine aminopeptidase, type i | SAMN06296052_10161 | Not Available | Positive | 49478 - 50251 | 28603.1 |
| bacterial translation initiation factor 1 (bif-1) | SAMN06296052_10162 | Not Available | Positive | 50252 - 50470 | 8271.18 |
| ssu ribosomal protein s13p | SAMN06296052_10163 | Not Available | Positive | 50601 - 50978 | 14048.2 |
| ssu ribosomal protein s11p | SAMN06296052_10164 | Not Available | Positive | 50988 - 51380 | 13994.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
