Methanobrevibacter sp. YE315

Gram-positiveRod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobrevibacter

Description

Methanobrevibacter sp. YE315 is a Gram-positive archaeon characterized by its rod-shaped morphology. This organism is notable for having a single replicon, indicating a streamlined genetic structure which can be advantageous for its survival and adaptation in specific environments. The accession number for Methanobrevibacter sp. YE315 is NZ_CP010834.1, which provides a reference for genomic studies and further research into its genetic makeup and functional capabilities. As a member of the Methanobrevibacter genus, this species is likely involved in methanogenesis, a critical biological process where methane is produced from organic matter under anaerobic conditions. The ecological significance of Methanobrevibacter sp. YE315 may lie in its role in the carbon cycle, particularly in anaerobic environments such as wetlands, ruminant digestive systems, and other habitats where organic matter decomposition occurs. By facilitating the conversion of organic substrates into methane, Methanobrevibacter sp. YE315 contributes to greenhouse gas emissions, which can impact climate change dynamics. Understanding the characteristics and functions of this archaeon can provide insights into methane production processes and their ecological implications.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobrevibacter
SpeciesMethanobrevibacter sp. YE315
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanobrevibacter sp. YE315


Gene Summary

Adenine Count

748782 bp

Thymine Count

745953 bp

Guanine Count

387585 bp

Cytosine Count

390976 bp

Genome Length

2273296 bp

Protein-coding Genes

2086 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolase family proteinTL18_RS00110A5UMN6Negative36094 - 3739847710.8
histone family proteinTL18_RS00115P19267Negative37445 - 376577632.37
atp phosphoribosyltransferaseTL18_RS00120O27550Positive37889 - 3874931312.3
aspartate carbamoyltransferaseTL18_RS00125A5UMP0Positive38778 - 3971334858.2
cdc6/cdc18 family proteinTL18_RS00130O27463Negative39706 - 4086943985.7
duf2299 domain-containing proteinTL18_RS00135Not AvailableNegative41508 - 4199018811.7
cobalamin biosynthesis proteinTL18_RS00140O27460Positive42057 - 4309438955.3
cobalt-precorrin 5a hydrolaseTL18_RS00145O87697Positive43091 - 4410737903.9
upf0147 family proteinTL18_RS00150O27458Negative44128 - 443769352.02
met repressorTL18_RS00155Not AvailablePositive44522 - 446835966.3

Displaying genes 21 – 30 of 2127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

147 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 147 metabolites

Health Effects

No health effects information available for this bacterium.