Stenotrophomonas sp. DDT-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. DDT-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. DDT-1


Gene Summary

Adenine Count

761811 bp

Thymine Count

752284 bp

Guanine Count

1482927 bp

Cytosine Count

1517547 bp

Genome Length

4514569 bp

Protein-coding Genes

2256 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
50s ribosomal protein l21AB839_09260Not Available+173 - 48111442.1
50s ribosomal protein l27AB839_09265Not Available+500 - 7639191.08
gtpase cgtaAB839_09270Not Available+941 - 199338013.6
30s ribosomal protein s20AB839_09275Not Available-2212 - 24819701.98
membrane proteinAB839_09280Not Available+2584 - 420358134.9
riboflavin kinaseAB839_09285Not Available+4279 - 522634680.8
isoleucine--trna ligaseAB839_09290Not Available+5223 - 8054104749.0
peptidase a8AB839_09295Not Available+8054 - 857819004.8
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseAB839_09300Not Available+8606 - 955634576.1
peptidase m61AB839_09305Not Available+9721 - 1160469249.0

Displaying genes 1 – 10 of 2256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

23 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00033532-dehydro-3-deoxy-6-phospho-D-galactonateC6H8O9PChemical structure of 2-dehydro-3-deoxy-6-phospho-D-galactonate32120-43-7
Average255.0961Da
Monoisotopic254.9905934Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004066di-trans,octa-cis-undecaprenolC55H90OChemical structure of di-trans,octa-cis-undecaprenolNot available
Average767.324Da
Monoisotopic766.6991675Da

Displaying 1–10 of 23 metabolites