Pyrococcus kukulkanii str. NCB100

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus kukulkanii strain NCB100 is a cocci-shaped archaeon that exhibits notable extremophilic characteristics. One defining feature of this organism is the presence of flagella, which likely contributes to its mobility in extreme environments. Pyrococcus species are typically found in high-temperature habitats, such as hydrothermal vents, where they thrive at elevated temperatures. This strain possesses a single replicon, indicative of a streamlined genomic organization that is common among many archaeal species. The genomic information for Pyrococcus kukulkanii str. NCB100 is accessible under the accession number NZ_CP010835.1, allowing for further study and analysis of its genetic composition. The ecological role of Pyrococcus kukulkanii str. NCB100 may be significant in extreme environments where it contributes to nutrient cycling and energy flow. Its ability to survive and proliferate in high-temperature settings suggests that it may play a role in the degradation of organic materials and the transformation of inorganic compounds, which can influence the overall microbial community structure and function. Understanding the traits of Pyrococcus kukulkanii can enhance our knowledge of microbial life in extreme conditions and its potential applications in biotechnology, particularly in processes that require high-temperature stability.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus kukulkanii
StrainNCB100

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus kukulkanii strain NCB100 chromosome, complete genome.

Gene Summary

Adenine Count

541989 bp

Thymine Count

552902 bp

Guanine Count

454622 bp

Cytosine Count

427613 bp

Genome Length

1977126 bp

Protein-coding Genes

2201 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rsmb/nop family class i sam-dependent rna methyltransferaseTQ32_RS10660Q9V106Negative1927471 - 192840035171.8
ribose-5-phosphate isomerase rpiaTQ32_RS10665Q8U1F0Negative1928397 - 192908625274.7
hypothetical proteinTQ32_RS10670Not AvailableNegative1929090 - 192941312467.5
hypothetical proteinTQ32_RS10675Not AvailableNegative1929397 - 193034436262.1
metallophosphoesteraseTQ32_RS10680Not AvailableNegative1930344 - 193091322074.0
16s rrna methyltransferaseTQ32_RS10685Q8U1E6Positive1930968 - 193164226121.0
sodium-dependent transporterTQ32_RS10690Not AvailablePositive1931699 - 193307250179.0
translation initiation factor if-5aTQ32_RS10695Q9V0M2Positive1933129 - 193354515329.7
mbl fold metallo-hydrolaseTQ32_RS10700Not AvailableNegative1933546 - 193434929790.2
nifb/nifx family molybdenum-iron cluster-binding proteinTQ32_RS10710Not AvailableNegative1934697 - 193514315398.5

Displaying genes 2211 – 2220 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

104 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 104 metabolites

Health Effects

No health effects information available for this bacterium.