Pyrococcus kukulkanii str. NCB100

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus kukulkanii strain NCB100 is a cocci-shaped archaeon that exhibits notable extremophilic characteristics. One defining feature of this organism is the presence of flagella, which likely contributes to its mobility in extreme environments. Pyrococcus species are typically found in high-temperature habitats, such as hydrothermal vents, where they thrive at elevated temperatures. This strain possesses a single replicon, indicative of a streamlined genomic organization that is common among many archaeal species. The genomic information for Pyrococcus kukulkanii str. NCB100 is accessible under the accession number NZ_CP010835.1, allowing for further study and analysis of its genetic composition. The ecological role of Pyrococcus kukulkanii str. NCB100 may be significant in extreme environments where it contributes to nutrient cycling and energy flow. Its ability to survive and proliferate in high-temperature settings suggests that it may play a role in the degradation of organic materials and the transformation of inorganic compounds, which can influence the overall microbial community structure and function. Understanding the traits of Pyrococcus kukulkanii can enhance our knowledge of microbial life in extreme conditions and its potential applications in biotechnology, particularly in processes that require high-temperature stability.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus kukulkanii
StrainNCB100

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus kukulkanii strain NCB100 chromosome, complete genome.

Gene Summary

Adenine Count

541989 bp

Thymine Count

552902 bp

Guanine Count

454622 bp

Cytosine Count

427613 bp

Genome Length

1977126 bp

Protein-coding Genes

2201 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-2 protease family proteinTQ32_RS00690Not AvailableNegative132947 - 13407441097.0
duf3201 domain-containing proteinTQ32_RS00695Not AvailablePositive134141 - 13464420307.1
rsmb/nop family class i sam-dependent rna methyltransferaseTQ32_RS00700O57712Positive134641 - 13579844126.0
lysylphosphatidylglycerol synthase transmembrane domain-containing proteinTQ32_RS00705O57713Positive135798 - 13682037818.4
duf835 domain-containing proteinTQ32_RS00710Not AvailableNegative136773 - 13751028323.1
bifunctional n(6)-l-threonylcarbamoyladenine synthase/serine/threonine protein kinaseTQ32_RS00715Q8U4B6Negative137504 - 13847835478.3
protein translocase subunit secfTQ32_RS00720Q8U4B5Positive138581 - 13945631904.8
preprotein translocase subunit secdTQ32_RS00725Q8U4B4Positive139453 - 14097655887.1
trka family potassium uptake proteinTQ32_RS00730Q9UXU0Positive140981 - 14166725200.7
v-type atp synthase subunit hTQ32_RS00735Not AvailablePositive141792 - 14210311963.5

Displaying genes 141 – 150 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

104 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 104 metabolites

Health Effects

No health effects information available for this bacterium.