Pseudomonas helleri

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas helleri is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species falls within the mesophilic temperature range, with an optimal growth temperature of 25°C. It is notable for having a single replicon and is classified as non-spore-forming, which indicates that it does not produce spores as a means of surviving unfavorable conditions. The aerobic nature of Pseudomonas helleri suggests that it requires oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. Its optimal growth temperature of 25°C aligns with typical conditions found in many natural habitats, including soil and water, where mesophilic organisms thrive. The accession number JYLD00000000.1 refers to its genetic data, which can provide insights into its genetic makeup and potential functional capabilities. Understanding such traits is crucial for assessing the ecological roles of Pseudomonas helleri in its natural habitats. Ecologically, the presence of Pseudomonas helleri may contribute to nutrient cycling and the degradation of organic materials due to its aerobic metabolism. This could play a role in maintaining soil health and supporting plant growth. The study of this bacterium can enhance our understanding of microbial dynamics in various ecosystems, particularly in environments where aerobic conditions prevail.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas helleri
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas helleri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas helleri strain DSM 29165 41_554_147.585, whole genome

Gene Summary

Adenine Count

1201609 bp

Thymine Count

1176798 bp

Guanine Count

1626627 bp

Cytosine Count

1671253 bp

Genome Length

5676287 bp

Protein-coding Genes

4756 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTU84_05820Not AvailablePositive1322026 - 132267325048.7
histidine kinaseTU84_05825Not AvailableNegative1322642 - 132410254408.3
chemotaxis protein cheyTU84_05830Not AvailableNegative1324092 - 132482327343.8
glucokinaseTU84_05835A6V2N1Negative1324934 - 132589033671.4
phosphogluconate dehydrataseTU84_05840P31961Negative1325887 - 132771365317.4
glyceraldehyde-3-phosphate dehydrogenaseTU84_05845P27726Positive1327921 - 132892236312.1
methylglyoxal synthaseTU84_05850B5XY41Positive1328927 - 132939116925.5
rna polymerase subunit sigma-24TU84_05855Not AvailablePositive1329595 - 133011319647.7
glycerol-3-phosphate abc transporter substrate-binding proteinTU84_05860Not AvailablePositive1330164 - 133113235592.4
tonb-dependent receptorTU84_05865Q57408Positive1331264 - 133386194495.9

Displaying genes 1221 – 1230 of 4885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 318 metabolites

Health Effects

No health effects information available for this bacterium.