Pseudomonas helleri

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas helleri is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species falls within the mesophilic temperature range, with an optimal growth temperature of 25°C. It is notable for having a single replicon and is classified as non-spore-forming, which indicates that it does not produce spores as a means of surviving unfavorable conditions. The aerobic nature of Pseudomonas helleri suggests that it requires oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. Its optimal growth temperature of 25°C aligns with typical conditions found in many natural habitats, including soil and water, where mesophilic organisms thrive. The accession number JYLD00000000.1 refers to its genetic data, which can provide insights into its genetic makeup and potential functional capabilities. Understanding such traits is crucial for assessing the ecological roles of Pseudomonas helleri in its natural habitats. Ecologically, the presence of Pseudomonas helleri may contribute to nutrient cycling and the degradation of organic materials due to its aerobic metabolism. This could play a role in maintaining soil health and supporting plant growth. The study of this bacterium can enhance our understanding of microbial dynamics in various ecosystems, particularly in environments where aerobic conditions prevail.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas helleri
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas helleri
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas helleri strain DSM 29165 41_554_147.585, whole genome

Gene Summary

Adenine Count

1201609 bp

Thymine Count

1176798 bp

Guanine Count

1626627 bp

Cytosine Count

1671253 bp

Genome Length

5676287 bp

Protein-coding Genes

4756 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion proteinTU84_05355Not AvailableNegative1222580 - 122436167368.7
type vi secretion proteinTU84_05360Not AvailableNegative1224436 - 122484614780.7
type vi secretion proteinTU84_05365Q9I748Negative1224859 - 122633455712.1
type vi secretion proteinTU84_05370Not AvailableNegative1226363 - 122686918361.3
type vi secretion protein impaTU84_05375Not AvailableNegative1226904 - 122845459134.5
exodeoxyribonuclease vii small subunitTU84_05380Q4K5A7Positive1228864 - 12291068976.47
geranyl transferaseTU84_05385P22939Positive1229103 - 122999031534.6
1-deoxy-d-xylulose-5-phosphate synthaseTU84_05390C3K2R1Positive1230123 - 123202168660.8
iron-hydroxamate abc transporter substrate-binding proteinTU84_05395A5F5P5Negative1232109 - 123290028890.2
gtp cyclohydrolaseTU84_05400C3K2R5Negative1232900 - 123351722167.8

Displaying genes 1131 – 1140 of 4885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 318 metabolites

Health Effects

No health effects information available for this bacterium.