Natrinema thermophila

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema thermophila is a notable archaeon characterized by its single replicon, which contributes to its genomic structure and replication dynamics. The organism is cataloged under the accession number PDBS00000000.1, indicating that its genomic data is available for further study and analysis. As a thermophilic archaeon, Natrinema thermophila thrives in high-temperature environments, suggesting adaptations that enable it to maintain cellular functions and integrity under extreme conditions. Such adaptations are common in thermophiles and may involve specialized proteins and enzymes that remain stable and functional at elevated temperatures. From a biological perspective, the presence of only one replicon may indicate a streamlined genome, which can be advantageous for survival in harsh environments by allowing for efficient replication and resource allocation. Additionally, the single replicon structure can lead to unique regulatory mechanisms for gene expression and replication, which are areas of interest in microbial genetics and evolutionary biology. Ecologically, Natrinema thermophila plays a role in its native habitat by participating in biogeochemical cycles, particularly in environments with high salinity and temperature, such as salt flats and hot springs. Understanding its metabolic capabilities and interactions within microbial communities can provide insights into the functional roles of archaea in extreme ecosystems. Overall, Natrinema thermophila serves as a model organism for studying thermophilic adaptations and the ecological dynamics of extremophiles.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema sp. CBA1119
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema sp. CBA1119 contig00009, whole genome shotgun sequence.

Gene Summary

Adenine Count

953202 bp

Thymine Count

955416 bp

Guanine Count

1576168 bp

Cytosine Count

1573272 bp

Genome Length

5058058 bp

Protein-coding Genes

4629 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporter permeaseCP556_07350Not AvailablePositive1497940 - 149932848160.2
hypothetical proteinCP556_07355Not AvailableNegative1499347 - 149991619610.2
ai-2e family transporterCP556_07360Not AvailableNegative1500002 - 150111439017.9
abc transporter substrate-binding proteinCP556_07365Not AvailablePositive1501233 - 150235141482.0
sulfate abc transporter permeaseCP556_07370Not AvailablePositive1502356 - 150426967816.7
abc transporter atp-binding proteinCP556_07375Not AvailablePositive1504266 - 150531238222.8
hypothetical proteinCP556_07380Not AvailablePositive1505412 - 150572311522.9
hypothetical proteinCP556_07385Not AvailablePositive1505805 - 15059967162.41
slc13 family permeaseCP556_07390Not AvailableNegative1506003 - 150787466064.5
dna repair helicaseCP556_07395Not AvailableNegative1508053 - 151042887204.5

Displaying genes 1461 – 1470 of 4715 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.