Actinorugispora endophytica str. DSM 46770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Actinorugispora

Description

Actinorugispora endophytica str. DSM 46770 is a notable bacterial strain categorized under the genus Actinorugispora. It is characterized by having a single replicon, which is a defining trait in its genomic structure. The strain is cataloged with the accession number SNYN00000000.1, indicating its entry into genomic databases for further research and reference. As an endophytic bacterium, Actinorugispora endophytica str. DSM 46770 resides within plant tissues without causing harm to the host. This symbiotic relationship may provide benefits to the host plant, such as enhanced nutrient acquisition or protection against pathogens. The endophytic lifestyle is significant as it contributes to the overall health and resilience of plant ecosystems. Studying organisms like Actinorugispora endophytica str. DSM 46770 is crucial for understanding plant-microbe interactions and the potential applications in agriculture. The insights gained from this strain could lead to the development of natural biostimulants or biocontrol agents, promoting sustainable agricultural practices. Overall, the investigation of Actinorugispora endophytica str. DSM 46770 provides a foundation for exploring the ecological roles of endophytic bacteria in plant health and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusActinorugispora
SpeciesActinorugispora endophytica
StrainDSM 46770

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinorugispora endophytica strain DSM 46770 Ga0310471_144, whole

Gene Summary

Adenine Count

721263 bp

Thymine Count

727095 bp

Guanine Count

1908327 bp

Cytosine Count

1895717 bp

Genome Length

5253007 bp

Protein-coding Genes

4594 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex transport system substrate-binding proteinEV190_10260Not AvailablePositive1006241 - 100728436618.7
iron complex transport system permease proteinEV190_10261Not AvailablePositive1007290 - 100831533768.8
iron complex transport system atp-binding proteinEV190_10262Not AvailablePositive1008315 - 100910327873.5
heme oxygenase-like proteinEV190_10263Not AvailablePositive1009230 - 101025836796.6
glycosyl transferase family 21EV190_10264Not AvailablePositive1010255 - 101140340623.7
uncharacterized protein duf4180EV190_10265Not AvailableNegative1011503 - 101188313624.2
excisionase family dna binding proteinEV190_10266Not AvailableNegative1011956 - 101238115178.2
gamma-glutamyltranspeptidase/glutathione hydrolaseEV190_10267Not AvailableNegative1012541 - 101432861195.4
superfamily ii dna/rna helicaseEV190_10268Not AvailableNegative1015035 - 101651352416.9
putative cold-shock dna-binding proteinEV190_10269Not AvailableNegative1016774 - 10169626733.86

Displaying genes 961 – 970 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.