Actinorugispora endophytica str. DSM 46770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Actinorugispora

Description

Actinorugispora endophytica str. DSM 46770 is a notable bacterial strain categorized under the genus Actinorugispora. It is characterized by having a single replicon, which is a defining trait in its genomic structure. The strain is cataloged with the accession number SNYN00000000.1, indicating its entry into genomic databases for further research and reference. As an endophytic bacterium, Actinorugispora endophytica str. DSM 46770 resides within plant tissues without causing harm to the host. This symbiotic relationship may provide benefits to the host plant, such as enhanced nutrient acquisition or protection against pathogens. The endophytic lifestyle is significant as it contributes to the overall health and resilience of plant ecosystems. Studying organisms like Actinorugispora endophytica str. DSM 46770 is crucial for understanding plant-microbe interactions and the potential applications in agriculture. The insights gained from this strain could lead to the development of natural biostimulants or biocontrol agents, promoting sustainable agricultural practices. Overall, the investigation of Actinorugispora endophytica str. DSM 46770 provides a foundation for exploring the ecological roles of endophytic bacteria in plant health and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusActinorugispora
SpeciesActinorugispora endophytica
StrainDSM 46770

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinorugispora endophytica strain DSM 46770 Ga0310471_144, whole

Gene Summary

Adenine Count

721263 bp

Thymine Count

727095 bp

Guanine Count

1908327 bp

Cytosine Count

1895717 bp

Genome Length

5253007 bp

Protein-coding Genes

4594 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
monosaccharide abc transporter membrane protein (cut2 family)EV190_1244Not AvailableNegative4464642 - 446566134638.7
monosaccharide abc transporter atp-binding protein (cut2 family)EV190_1245Not AvailableNegative4465658 - 446718454021.6
monosaccharide abc transporter substrate-binding protein (cut2 family)EV190_1246Not AvailableNegative4467255 - 446828636109.2
gntr family transcriptional regulatorEV190_1247Not AvailablePositive4468734 - 446945926106.0
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayEV190_1248Not AvailablePositive4469636 - 447048730181.7
l-fuconate dehydrataseEV190_1249Not AvailablePositive4470487 - 447180047940.8
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)EV190_12410Not AvailablePositive4471797 - 447259126515.4
d-threo-aldose 1-dehydrogenaseEV190_12411Not AvailablePositive4472588 - 447360136131.8
l-rhamnose mutarotaseEV190_12412Not AvailablePositive4473598 - 447393013445.9
hypothetical proteinEV190_12413Not AvailablePositive4473930 - 447583469383.5

Displaying genes 3961 – 3970 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.