Actinorugispora endophytica str. DSM 46770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Actinorugispora

Description

Actinorugispora endophytica str. DSM 46770 is a notable bacterial strain categorized under the genus Actinorugispora. It is characterized by having a single replicon, which is a defining trait in its genomic structure. The strain is cataloged with the accession number SNYN00000000.1, indicating its entry into genomic databases for further research and reference. As an endophytic bacterium, Actinorugispora endophytica str. DSM 46770 resides within plant tissues without causing harm to the host. This symbiotic relationship may provide benefits to the host plant, such as enhanced nutrient acquisition or protection against pathogens. The endophytic lifestyle is significant as it contributes to the overall health and resilience of plant ecosystems. Studying organisms like Actinorugispora endophytica str. DSM 46770 is crucial for understanding plant-microbe interactions and the potential applications in agriculture. The insights gained from this strain could lead to the development of natural biostimulants or biocontrol agents, promoting sustainable agricultural practices. Overall, the investigation of Actinorugispora endophytica str. DSM 46770 provides a foundation for exploring the ecological roles of endophytic bacteria in plant health and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusActinorugispora
SpeciesActinorugispora endophytica
StrainDSM 46770

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinorugispora endophytica strain DSM 46770 Ga0310471_144, whole

Gene Summary

Adenine Count

721263 bp

Thymine Count

727095 bp

Guanine Count

1908327 bp

Cytosine Count

1895717 bp

Genome Length

5253007 bp

Protein-coding Genes

4594 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium uptake protein trkaEV190_11531Not AvailableNegative3674469 - 367515224198.8
23s rrna m(5)u-1939 methyltransferaseEV190_11532Not AvailablePositive3675594 - 367685345505.2
hypothetical proteinEV190_11533Not AvailableNegative3677035 - 367861555862.4
abc-type multidrug transport system atpase subunitEV190_11534Not AvailableNegative3678612 - 367951732392.7
putative zinc finger proteinEV190_11535Not AvailableNegative3679538 - 368035029013.0
rna polymerase sigma-70 factor (ecf subfamily)EV190_11536Not AvailableNegative3680347 - 368093121284.6
f420-dependent oxidoreductase-like proteinEV190_11537Not AvailablePositive3681140 - 368207233459.4
aconitaseEV190_11538Not AvailablePositive3682480 - 368520697962.2
stage ii sporulation protein aa (anti-sigma f factor antagonist)EV190_11539Not AvailableNegative3685565 - 368592712609.3
alkanesulfonate monooxygenase ssud/methylene tetrahydromethanopterin reductase-like flavin-dependent oxidoreductase (luciferase family)EV190_11540Not AvailablePositive3686405 - 368750540243.2

Displaying genes 3261 – 3270 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.