Actinorugispora endophytica str. DSM 46770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Actinorugispora

Description

Actinorugispora endophytica str. DSM 46770 is a notable bacterial strain categorized under the genus Actinorugispora. It is characterized by having a single replicon, which is a defining trait in its genomic structure. The strain is cataloged with the accession number SNYN00000000.1, indicating its entry into genomic databases for further research and reference. As an endophytic bacterium, Actinorugispora endophytica str. DSM 46770 resides within plant tissues without causing harm to the host. This symbiotic relationship may provide benefits to the host plant, such as enhanced nutrient acquisition or protection against pathogens. The endophytic lifestyle is significant as it contributes to the overall health and resilience of plant ecosystems. Studying organisms like Actinorugispora endophytica str. DSM 46770 is crucial for understanding plant-microbe interactions and the potential applications in agriculture. The insights gained from this strain could lead to the development of natural biostimulants or biocontrol agents, promoting sustainable agricultural practices. Overall, the investigation of Actinorugispora endophytica str. DSM 46770 provides a foundation for exploring the ecological roles of endophytic bacteria in plant health and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusActinorugispora
SpeciesActinorugispora endophytica
StrainDSM 46770

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinorugispora endophytica strain DSM 46770 Ga0310471_144, whole

Gene Summary

Adenine Count

721263 bp

Thymine Count

727095 bp

Guanine Count

1908327 bp

Cytosine Count

1895717 bp

Genome Length

5253007 bp

Protein-coding Genes

4594 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large subunit ribosomal protein l25EV190_101180Not AvailableNegative199738 - 20033420706.7
ribose-phosphate pyrophosphokinaseEV190_101181Not AvailableNegative200600 - 20158335734.1
udp-n-acetylglucosamine pyrophosphorylase /glucosamine-1-phosphate n-acetyltransferaseEV190_101182Not AvailableNegative201650 - 20310750834.8
Trna-pseudoNot AvailableNot AvailablePositive203421 - 203495Not Available
homeodomain-like domain-containing proteinEV190_101184Not AvailableNegative203699 - 20463435352.3
stearoyl-coa desaturase (delta-9 desaturase)EV190_101185Not AvailablePositive205038 - 20599436016.3
tetr family transcriptional regulatorEV190_101186Not AvailablePositive206009 - 20666824191.9
marr family transcriptional regulatorEV190_101187Not AvailablePositive206726 - 20721718623.2
atp-binding cassette subfamily f protein uupEV190_101188Not AvailableNegative207620 - 20939865827.4
transketolaseEV190_101189Not AvailableNegative209447 - 21038532984.7

Displaying genes 181 – 190 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.