Actinorugispora endophytica str. DSM 46770

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Actinorugispora

Description

Actinorugispora endophytica str. DSM 46770 is a notable bacterial strain categorized under the genus Actinorugispora. It is characterized by having a single replicon, which is a defining trait in its genomic structure. The strain is cataloged with the accession number SNYN00000000.1, indicating its entry into genomic databases for further research and reference. As an endophytic bacterium, Actinorugispora endophytica str. DSM 46770 resides within plant tissues without causing harm to the host. This symbiotic relationship may provide benefits to the host plant, such as enhanced nutrient acquisition or protection against pathogens. The endophytic lifestyle is significant as it contributes to the overall health and resilience of plant ecosystems. Studying organisms like Actinorugispora endophytica str. DSM 46770 is crucial for understanding plant-microbe interactions and the potential applications in agriculture. The insights gained from this strain could lead to the development of natural biostimulants or biocontrol agents, promoting sustainable agricultural practices. Overall, the investigation of Actinorugispora endophytica str. DSM 46770 provides a foundation for exploring the ecological roles of endophytic bacteria in plant health and productivity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusActinorugispora
SpeciesActinorugispora endophytica
StrainDSM 46770

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinorugispora endophytica strain DSM 46770 Ga0310471_144, whole

Gene Summary

Adenine Count

721263 bp

Thymine Count

727095 bp

Guanine Count

1908327 bp

Cytosine Count

1895717 bp

Genome Length

5253007 bp

Protein-coding Genes

4594 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle-docking protein ftsyEV190_103132Not AvailablePositive1470441 - 147167042540.2
abc-2 type transport system permease proteinEV190_103133Not AvailableNegative1471762 - 147255927116.0
abc-2 type transport system atp-binding proteinEV190_103134Not AvailableNegative1472549 - 147347833649.3
ammonium transporterEV190_103135Not AvailablePositive1473860 - 147515545013.2
hypothetical proteinEV190_103136Not AvailablePositive1475515 - 147670541337.5
signal recognition particle subunit ffh/srp54 (srp54)EV190_103137Not AvailablePositive1476855 - 147845057222.3
small subunit ribosomal protein s16EV190_103138Not AvailablePositive1478710 - 147914715944.2
rna-binding protein with kh domainEV190_103139Not AvailablePositive1479149 - 14793919024.06
16s rrna processing protein rimmEV190_103140Not AvailablePositive1479599 - 148011118051.5
trna (guanine37-n(1)-) methyltransferaseEV190_103141Not AvailablePositive1480126 - 148091128609.9

Displaying genes 1361 – 1370 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.