Lentzea guizhouensis str. DHS C013

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Lentzea

Description

Lentzea guizhouensis str. DHS C013 is characterized by having a single replicon, which is an important trait for its genetic stability and replication. This bacterium has been cataloged under the accession number NZ_CP016793.1, indicating that its genomic sequence is available for further scientific study and analysis. As a member of the genus Lentzea, this strain is likely to exhibit traits typical of actinobacteria, such as the ability to produce secondary metabolites. While specific metabolic capabilities and ecological roles of Lentzea guizhouensis str. DHS C013 are not detailed in the provided evidence, members of the genus are often studied for their potential in natural product biosynthesis, including antibiotics and other bioactive compounds. Understanding the genomic structure, including the presence of a single replicon, may provide insights into the organism’s evolutionary adaptations and its ecological niche. This trait can influence the bacterium's response to environmental pressures and its interactions with other microorganisms in its habitat. Such insights could be valuable for biotechnological applications, particularly in exploring the potential of Lentzea guizhouensis str. DHS C013 in natural product discovery and development.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusLentzea
SpeciesLentzea guizhouensis
StrainDHS C013

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lentzea guizhouensis strain DHS C013 chromosome, complete genome.

Gene Summary

Adenine Count

1500796 bp

Thymine Count

1498005 bp

Guanine Count

3500146 bp

Cytosine Count

3498925 bp

Genome Length

9997872 bp

Protein-coding Genes

9773 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam/spasm domain-containing proteinBBK82_RS01555Not AvailablePositive326901 - 32768327356.6
chloramphenicol phosphotransferase cptBBK82_RS01560Q56148Negative327661 - 32822419746.6
nad(p)/fad-dependent oxidoreductaseBBK82_RS01565Q04799Negative328579 - 32989848638.9
atp-binding cassette domain-containing proteinBBK82_RS01570Not AvailablePositive329998 - 33096934638.1
abc transporter permeaseBBK82_RS01575Not AvailablePositive330966 - 33176629136.4
hypothetical proteinBBK82_RS01580Not AvailablePositive331825 - 33251124663.2
rtcb family proteinBBK82_RS01585P46850Positive332522 - 33370042773.1
hypothetical proteinBBK82_RS01590Not AvailablePositive333770 - 33434821737.6
hypothetical proteinBBK82_RS01595Not AvailablePositive334341 - 33494923542.8
hypothetical proteinBBK82_RS01600Not AvailableNegative335009 - 33535012669.0

Displaying genes 351 – 360 of 9878 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

505 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 505 metabolites

Health Effects

No health effects information available for this bacterium.