Vibrio sp. PID23_8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. PID23_8 is characterized by having a single replicon, which indicates a streamlined genomic structure that can facilitate efficient replication and metabolic processes. This organism is cataloged under the accession number LIXE00000000.1, providing a reference point for further genetic and genomic studies. The genus Vibrio encompasses a diverse group of bacteria, many of which are known to thrive in marine environments. While specific ecological traits of Vibrio sp. PID23_8 are not detailed here, members of this genus are often associated with aquatic habitats, where they play significant roles in nutrient cycling and can interact with various marine organisms. Understanding the genomic traits of Vibrio sp. PID23_8, particularly its single replicon, could provide insights into its adaptation mechanisms within its ecological niche. The efficiency associated with having fewer replicons may confer advantages in certain environments, potentially influencing its survival, virulence, or metabolic versatility. In summary, Vibrio sp. PID23_8, with its single replicon, represents an interesting subject for microbial studies, particularly concerning its ecological roles and evolutionary adaptations within marine ecosystems. Further research could elucidate its specific interactions and contributions to the marine microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. PID23_8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. PID23_8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. PID23_8 contig_30, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3554 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease v subunit betaAK966_02600Not AvailableNegative577286 - 580924135920.0
exonuclease v subunit gammaAK966_02605Not AvailableNegative581263 - 584751131905.0
c4-dicarboxylate abc transporterAK966_02610Not AvailableNegative584956 - 58591534721.5
xre family transcriptional regulatorAK966_02615Not AvailablePositive586026 - 58694334521.1
multidrug dmt transporter permeaseAK966_02620Not AvailablePositive587061 - 58735710942.1
2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferaseAK966_02625Not AvailablePositive587611 - 58864235740.7
glycerate kinaseAK966_02630Not AvailableNegative588768 - 58990138999.9
glycerol kinaseAK966_02635Not AvailablePositive590251 - 59177155653.0
glycerol-3-phosphate dehydrogenaseAK966_02640Not AvailablePositive591913 - 59345758003.6
murein transglycosylaseAK966_02645Not AvailablePositive593605 - 59472041865.0

Displaying genes 531 – 540 of 3670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.