Vibrio sp. PID23_8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. PID23_8 is characterized by having a single replicon, which indicates a streamlined genomic structure that can facilitate efficient replication and metabolic processes. This organism is cataloged under the accession number LIXE00000000.1, providing a reference point for further genetic and genomic studies. The genus Vibrio encompasses a diverse group of bacteria, many of which are known to thrive in marine environments. While specific ecological traits of Vibrio sp. PID23_8 are not detailed here, members of this genus are often associated with aquatic habitats, where they play significant roles in nutrient cycling and can interact with various marine organisms. Understanding the genomic traits of Vibrio sp. PID23_8, particularly its single replicon, could provide insights into its adaptation mechanisms within its ecological niche. The efficiency associated with having fewer replicons may confer advantages in certain environments, potentially influencing its survival, virulence, or metabolic versatility. In summary, Vibrio sp. PID23_8, with its single replicon, represents an interesting subject for microbial studies, particularly concerning its ecological roles and evolutionary adaptations within marine ecosystems. Further research could elucidate its specific interactions and contributions to the marine microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. PID23_8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. PID23_8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. PID23_8 contig_30, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3554 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general secretion pathway protein gspiAK966_14970Not AvailablePositive3267079 - 326747414432.7
general secretion pathway protein gspjAK966_14975Not AvailablePositive3267461 - 326818027291.4
general secretion pathway protein gspkAK966_14980Not AvailablePositive3268173 - 326918337525.3
general secretion pathway protein gsplAK966_14985Not AvailablePositive3269152 - 327035444632.4
general secretion pathway protein gspmAK966_14990Not AvailablePositive3270363 - 327085418825.8
general secretion pathway protein gspnAK966_14995Not AvailablePositive3270856 - 327161727416.5
3'-5'-bisphosphate nucleotidaseAK966_15000Not AvailableNegative3271909 - 327273630509.2
adp-ribose diphosphataseAK966_15005Not AvailableNegative3272782 - 327335121249.6
amino acid abc transporter substrate-binding proteinAK966_15010Not AvailableNegative3273566 - 327415020881.4
competence protein comfAK966_15015Not AvailableNegative3274248 - 327497327328.0

Displaying genes 2901 – 2910 of 3670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.