Vibrio sp. PID23_8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. PID23_8 is characterized by having a single replicon, which indicates a streamlined genomic structure that can facilitate efficient replication and metabolic processes. This organism is cataloged under the accession number LIXE00000000.1, providing a reference point for further genetic and genomic studies. The genus Vibrio encompasses a diverse group of bacteria, many of which are known to thrive in marine environments. While specific ecological traits of Vibrio sp. PID23_8 are not detailed here, members of this genus are often associated with aquatic habitats, where they play significant roles in nutrient cycling and can interact with various marine organisms. Understanding the genomic traits of Vibrio sp. PID23_8, particularly its single replicon, could provide insights into its adaptation mechanisms within its ecological niche. The efficiency associated with having fewer replicons may confer advantages in certain environments, potentially influencing its survival, virulence, or metabolic versatility. In summary, Vibrio sp. PID23_8, with its single replicon, represents an interesting subject for microbial studies, particularly concerning its ecological roles and evolutionary adaptations within marine ecosystems. Further research could elucidate its specific interactions and contributions to the marine microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. PID23_8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. PID23_8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. PID23_8 contig_30, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3554 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter permeaseAK966_11850Not AvailableNegative2600434 - 260120428019.4
spermidine/putrescine abc transporter permeaseAK966_11855Not AvailableNegative2601204 - 260206432054.0
putrescine/spermidine abc transporter atpaseAK966_11860Not AvailableNegative2602045 - 260317842591.2
hypothetical proteinAK966_11865Not AvailablePositive2603562 - 260435329013.2
glucosaminidaseAK966_11870Not AvailablePositive2604346 - 260517931219.1
hypothetical proteinAK966_11875Not AvailablePositive2605199 - 260586124693.8
trna 2-thiocytidine biosynthesis protein ttcaAK966_11880Not AvailablePositive2606062 - 260695533947.9
universal stress protein uspeAK966_11885Not AvailableNegative2607010 - 260795735343.3
transcriptional regulatorAK966_11890Not AvailableNegative2608138 - 260888427806.7
cytochrome biogenesis proteinAK966_11895Not AvailableNegative2608975 - 260965224146.6

Displaying genes 2311 – 2320 of 3670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.