Vibrio sp. PID23_8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. PID23_8 is characterized by having a single replicon, which indicates a streamlined genomic structure that can facilitate efficient replication and metabolic processes. This organism is cataloged under the accession number LIXE00000000.1, providing a reference point for further genetic and genomic studies. The genus Vibrio encompasses a diverse group of bacteria, many of which are known to thrive in marine environments. While specific ecological traits of Vibrio sp. PID23_8 are not detailed here, members of this genus are often associated with aquatic habitats, where they play significant roles in nutrient cycling and can interact with various marine organisms. Understanding the genomic traits of Vibrio sp. PID23_8, particularly its single replicon, could provide insights into its adaptation mechanisms within its ecological niche. The efficiency associated with having fewer replicons may confer advantages in certain environments, potentially influencing its survival, virulence, or metabolic versatility. In summary, Vibrio sp. PID23_8, with its single replicon, represents an interesting subject for microbial studies, particularly concerning its ecological roles and evolutionary adaptations within marine ecosystems. Further research could elucidate its specific interactions and contributions to the marine microbial community.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. PID23_8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. PID23_8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. PID23_8 contig_30, whole genome shotgun sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3554 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftsiAK966_09475Not AvailablePositive2054296 - 205609565376.0
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseAK966_09480Not AvailablePositive2056147 - 205762853275.8
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseAK966_09485Not AvailablePositive2057625 - 205898948760.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseAK966_09490Not AvailablePositive2058989 - 206007139914.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseAK966_09495Not AvailablePositive2060120 - 206143347132.5
cell division protein ftswAK966_09500Not AvailablePositive2061452 - 206264243569.6
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseAK966_09505Not AvailablePositive2062629 - 206369638228.5
udp-n-acetylmuramate--alanine ligaseAK966_09510Not AvailablePositive2063719 - 206517652769.1
cell division protein ftsqAK966_09515Not AvailablePositive2065368 - 206615329821.6
cell division protein ftsaAK966_09520Not AvailablePositive2066146 - 206741445661.3

Displaying genes 1851 – 1860 of 3670 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.