Pseudomonas cerasi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas cerasi is a bacterial species primarily found in almond orchards, indicating a specialized ecological niche associated with agricultural environments. This bacterium has been identified as a pathogen affecting hosts such as Prunus avium (sweet cherry) and Prunus dulcis (almond). One of the significant health effects attributed to Pseudomonas cerasi is the development of cankers on these host plants, which can impact crop yield and plant health. The genetic complexity of Pseudomonas cerasi is notable, as it possesses 12 replicons, suggesting a diverse and adaptable genomic architecture that may contribute to its pathogenicity and survival in various environments. Several accessions of Pseudomonas cerasi have been documented, including NZ_LT963401.1, NZ_LT222319.1, and others, indicating the presence of multiple strains within this species. Understanding the ecological role of Pseudomonas cerasi in almond orchards is essential for agricultural management, particularly in preventing and controlling canker diseases. The interactions between this bacterium and its host plants may influence overall orchard health and productivity. Therefore, further research into Pseudomonas cerasi is warranted to develop effective strategies for managing its impact on Prunus species, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cerasi
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cerasi
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatalmond orchards
Biotic relationshipNot Available
Host(s)Prunus avium, Prunus dulcis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1206158 bp

Thymine Count

1207450 bp

Guanine Count

1737691 bp

Cytosine Count

1740436 bp

Genome Length

5891735 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

199 genes

# of Chromosomes/Plasmids

12

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hdod domain-containing proteinPCPL58_RS02930Not AvailableNegative113842 - 11522449330.0
4-aminobutyrate--2-oxoglutarate transaminasePCPL58_RS02935Not AvailableNegative115381 - 11666144977.8
nadp-dependent succinate-semialdehyde dehydrogenasePCPL58_RS02940Not AvailableNegative116841 - 11828351460.8
tniq family proteinPCPL58_RS30565Not AvailableNegative118612 - 1186922814.51
fad-dependent monooxygenasePCPL58_RS02945Not AvailableNegative118738 - 12000645876.6
Trna-argNot AvailableNot AvailablePositive120163 - 120239Not Available
tyrosine-type recombinase/integrasePCPL58_RS02955Not AvailablePositive120407 - 12164246751.1
is5 family transposasePCPL58_RS02960Not AvailableNegative121878 - 12285537139.0
hypothetical proteinPCPL58_RS31960Not AvailableNegative122862 - 1231289851.24
chromosome segregation protein smcPCPL58_RS02965Not AvailablePositive123054 - 12381228751.6

Displaying genes 251 – 260 of 6293 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CankersCausesPMC11448091

Displaying health effects 1 – 1 of 1 in total