Roseovarius sp. A-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius sp. A-2 is characterized as a Gram-negative bacterium, which is a crucial trait that influences its cellular structure and biological functions. This classification signifies that it possesses a thin peptidoglycan layer surrounded by an outer membrane, typical of Gram-negative bacteria. The organism has a single replicon, indicating that it has a streamlined genomic structure that may facilitate efficient replication and genetic stability. The genomic data for Roseovarius sp. A-2 can be accessed under the accession number BDIY00000000.1. This provides a specific reference for researchers interested in studying its genetic makeup or exploring its potential applications in microbial research or biotechnology. From an ecological perspective, members of the Roseovarius genus are often found in marine environments, suggesting that Roseovarius sp. A-2 may play a role in aquatic ecosystems. The traits of being Gram-negative and having a single replicon could be advantageous in adapting to the diverse and often challenging conditions of marine habitats. Such adaptations may include interactions with other microorganisms, participation in nutrient cycling, or contributions to biofilm formation, which are all vital processes in maintaining the health and stability of aquatic ecosystems. Understanding the specific traits of Roseovarius sp. A-2 can thus shed light on its ecological role and potential contributions to marine microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius sp. A-2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius sp. A-2 DNA, contig: RA2_contig0126, whole genome

Gene Summary

Adenine Count

846014 bp

Thymine Count

858016 bp

Guanine Count

1456459 bp

Cytosine Count

1424089 bp

Genome Length

4584578 bp

Protein-coding Genes

4491 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eama-like transporter family proteinRA2_00028Not AvailableNegative26843 - 2778433521.1
putative non-heme bromoperoxidase bpocRA2_00029Not AvailableNegative27781 - 2859029307.0
large-conductance mechanosensitive channelRA2_00030Not AvailablePositive28796 - 2921814759.2
small-conductance mechanosensitive channelRA2_00031Not AvailablePositive29302 - 3010828535.8
laccase domain protein yfihRA2_00032Not AvailableNegative30588 - 3134326750.5
hypothetical proteinRA2_00033Not AvailableNegative31340 - 3240137889.5
prolipoprotein diacylglyceryl transferaseRA2_00034Not AvailableNegative32398 - 3329732591.5
membrane fusogenic activityRA2_00035Not AvailablePositive33398 - 336439150.84
dna recombination protein rmucRA2_00036Not AvailableNegative33652 - 3483343146.9
dna mismatch repair protein mutlRA2_00037Not AvailableNegative34830 - 3667465788.5

Displaying genes 71 – 80 of 4563 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

12 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm00032855-methyltetrahydropteroyltri-L-glutamateC30H35N9O12Chemical structure of 5-methyltetrahydropteroyltri-L-glutamateNot available
Average713.663Da
Monoisotopic713.2427119Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da

Displaying 1–10 of 12 metabolites

Health Effects

No health effects information available for this bacterium.