Variovorax sp. 770b2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. 770b2 is a rod-shaped bacterium characterized by a single replicon. This trait indicates a streamlined genetic organization, which is often associated with efficient replication and adaptability in various environments. The organism is cataloged under the accession number FOXJ00000000.1, which provides a reference point for genomic studies and further research. The rod shape of Variovorax sp. 770b2 may contribute to its ecological versatility, as this morphology is commonly linked to motility and the ability to colonize diverse substrates. Rod-shaped bacteria often exhibit enhanced surface area-to-volume ratios, facilitating nutrient uptake and enhancing metabolic capabilities, which can be advantageous in competitive microbial communities. The presence of Variovorax sp. 770b2 in its environment suggests a potential role in biogeochemical cycles, particularly in the degradation of organic compounds. Given the traits associated with the Variovorax genus, this bacterium may participate in processes such as bioremediation or nutrient cycling, making it a candidate for further investigation in environmental microbiology. Understanding the specific ecological roles and metabolic pathways of Variovorax sp. 770b2 could provide insights into its contributions to ecosystem functioning and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. 770b2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. 770b2 genome assembly, contig: Ga0059266_116, whole

Gene Summary

Adenine Count

1230811 bp

Thymine Count

1223657 bp

Guanine Count

2498289 bp

Cytosine Count

2496667 bp

Genome Length

7453785 bp

Protein-coding Genes

6757 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-serine deaminase, pyridoxal phosphate-dependentSAMN03159339_6420Not AvailablePositive6331375 - 633266147321.8
coniferyl-aldehyde dehydrogenaseSAMN03159339_6421Not AvailablePositive6332681 - 633407850787.3
transcriptional regulator, tetr familySAMN03159339_6422Not AvailableNegative6334098 - 633479325562.1
pimeloyl-acp methyl ester carboxylesteraseSAMN03159339_6423Not AvailablePositive6334991 - 633575526178.3
hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant)SAMN03159339_6424Not AvailablePositive6335766 - 633726552681.9
cytochrome c biogenesis protein ccdaSAMN03159339_6425Not AvailableNegative6337538 - 633936464504.2
signal transduction histidine kinaseSAMN03159339_6426Not AvailableNegative6339496 - 634089650751.1
peroxiredoxin, ohr subfamilySAMN03159339_6427Not AvailableNegative6340971 - 634138714282.9
microcystin degradation protein mlrc, contains duf1485 domainSAMN03159339_6428Not AvailableNegative6341520 - 634300752691.5
tripartite-type tricarboxylate transporter, receptor component tctcSAMN03159339_6429Not AvailableNegative6343004 - 634403836280.6

Displaying genes 5811 – 5820 of 6812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.