Variovorax sp. EL159

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. EL159 is a rod-shaped bacterium notable for its single replicon, indicating a streamlined genomic structure. The organism is classified under the genus Variovorax, which is known for its metabolic versatility and ability to thrive in diverse environments. The specific accession number for Variovorax sp. EL159 is FMUJ00000000.1, which facilitates its identification and study within microbial databases. This bacterium's rod shape suggests a potential adaptation for efficient nutrient uptake and motility, characteristics often associated with bacteria in various ecological niches. Variovorax species are commonly found in soil and aquatic environments, where they play significant roles in nutrient cycling and biodegradation processes. The presence of a single replicon in Variovorax sp. EL159 may reflect an evolutionary advantage in its ecological interactions, enabling it to replicate rapidly and respond effectively to environmental changes. This trait may contribute to its survival in competitive environments, where quick adaptation is crucial. Overall, the traits of Variovorax sp. EL159 highlight its potential ecological significance, particularly in bioremediation and nutrient cycling, as it may contribute to the degradation of pollutants and maintenance of soil health. Its rod shape and genomic organization provide insights into the organism's adaptability and ecological roles, emphasizing the importance of microbial diversity in ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. EL159
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. EL159 genome assembly, contig: Ga0059267_116, whole

Gene Summary

Adenine Count

1162382 bp

Thymine Count

1169281 bp

Guanine Count

2351010 bp

Cytosine Count

2318868 bp

Genome Length

7004648 bp

Protein-coding Genes

6365 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein nlpdSAMN03159363_0515Not AvailablePositive537584 - 53848631106.7
rna polymerase nonessential primary-like sigma factorSAMN03159363_0516Not AvailablePositive538491 - 53952838158.6
23s rrna (uracil1939-c5)-methyltransferaseSAMN03159363_0517Not AvailablePositive539592 - 54102852996.9
modulator of ftsh proteaseSAMN03159363_0518Not AvailableNegative541077 - 54177824860.2
uncharacterized conserved protein glcg, duf336 familySAMN03159363_0519Not AvailablePositive541942 - 54234913754.6
hemin uptake protein hempSAMN03159363_0520Not AvailableNegative542529 - 5427417370.01
biopolymer transport protein exbdSAMN03159363_0521Not AvailableNegative542835 - 54324815333.5
biopolymer transport protein exbbSAMN03159363_0522Not AvailableNegative543254 - 54397025476.9
outer membrane transport energization protein tonb (tc 2.c.1.1.1)SAMN03159363_0523Not AvailableNegative543993 - 54470024668.1
bacterioferritin-associated ferredoxinSAMN03159363_0524Not AvailableNegative544784 - 5450569685.53

Displaying genes 591 – 600 of 6480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.