Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. EL159 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1162382 bp
Thymine Count
1169281 bp
Guanine Count
2351010 bp
Cytosine Count
2318868 bp
Genome Length
7004648 bp
Protein-coding Genes
6365 genes
Non-Coding Genes
115 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN03159363_0928 | Not Available | Negative | 971397 - 971882 | 18227.0 |
| diaminopropionate ammonia-lyase | SAMN03159363_0929 | Not Available | Positive | 971921 - 973219 | 46683.6 |
| hypothetical protein | SAMN03159363_0930 | Not Available | Positive | 973409 - 973639 | 8129.92 |
| hypothetical protein | SAMN03159363_0931 | Not Available | Positive | 973710 - 974156 | 15709.2 |
| hypothetical protein | SAMN03159363_0932 | Not Available | Positive | 974303 - 974668 | 13843.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN03159363_0933 | Not Available | Negative | 974689 - 975870 | 42860.1 |
| dna-binding transcriptional regulator, lysr family | SAMN03159363_0934 | Not Available | Negative | 976529 - 977440 | 33513.3 |
| drug resistance transporter, emrb/qaca subfamily | SAMN03159363_0935 | Not Available | Positive | 977545 - 978972 | 50465.5 |
| hypothetical protein | SAMN03159363_0936 | Not Available | Positive | 978969 - 979370 | 14763.6 |
| hypothetical protein | SAMN03159363_0937 | Not Available | Negative | 979376 - 979780 | 13821.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
