Pseudomonas sp. NFIX28

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFIX28 is characterized by having a single replicon. Its genetic information is cataloged under the accession number FNPW00000000.1. The significance of having a single replicon suggests a streamlined genomic structure, which can impact the organism's replication and metabolic processes. This trait may contribute to its adaptability in various environments where Pseudomonas species are commonly found. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is particularly relevant in bioremediation efforts, where they can degrade pollutants and improve soil health. The genomic data provided by the accession number FNPW00000000.1 can facilitate further research into the specific traits and capabilities of Pseudomonas sp. NFIX28, potentially revealing insights into its ecological roles and applications in biotechnology. Understanding such traits can enhance our knowledge of microbial diversity and the functional roles of microorganisms in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFIX28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFIX28
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFIX28 genome assembly, contig:

Gene Summary

Adenine Count

1266361 bp

Thymine Count

1242748 bp

Guanine Count

2081710 bp

Cytosine Count

2122742 bp

Genome Length

6734225 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putrescine transport system permease proteinSAMN03159453_05938Not AvailablePositive6507999 - 650888331922.9
putrescine transport system substrate-binding proteinSAMN03159453_05939Not AvailablePositive6508992 - 651008939999.9
cbs domain-containing proteinSAMN03159453_05940Not AvailablePositive6511352 - 651179215908.6
transcriptional regulator, lysr familySAMN03159453_05941Not AvailableNegative6512005 - 651290733797.1
hypothetical proteinSAMN03159453_05942Not AvailablePositive6513042 - 651411237029.4
phosphoglycerol transferase mdobSAMN03159453_05943Not AvailablePositive6514348 - 651655581437.2
nad-dependent protein deacetylase, sir2 familySAMN03159453_05944Not AvailablePositive6516686 - 651752530872.2
lysr family transcriptional regulator, carnitine catabolism transcriptional activatorSAMN03159453_05945Not AvailableNegative6517522 - 651842733072.2
3-oxoacid coa-transferase subunit aSAMN03159453_05946Not AvailablePositive6518587 - 651928525040.0
3-oxoacid coa-transferase subunit bSAMN03159453_05947Not AvailablePositive6519318 - 651997723241.4

Displaying genes 5871 – 5880 of 6061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.