Pseudomonas sp. NFIX28

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFIX28 is characterized by having a single replicon. Its genetic information is cataloged under the accession number FNPW00000000.1. The significance of having a single replicon suggests a streamlined genomic structure, which can impact the organism's replication and metabolic processes. This trait may contribute to its adaptability in various environments where Pseudomonas species are commonly found. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is particularly relevant in bioremediation efforts, where they can degrade pollutants and improve soil health. The genomic data provided by the accession number FNPW00000000.1 can facilitate further research into the specific traits and capabilities of Pseudomonas sp. NFIX28, potentially revealing insights into its ecological roles and applications in biotechnology. Understanding such traits can enhance our knowledge of microbial diversity and the functional roles of microorganisms in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFIX28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFIX28
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFIX28 genome assembly, contig:

Gene Summary

Adenine Count

1266361 bp

Thymine Count

1242748 bp

Guanine Count

2081710 bp

Cytosine Count

2122742 bp

Genome Length

6734225 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-glutamyltranspeptidase / glutathione hydrolaseSAMN03159453_05544Not AvailableNegative6040836 - 604267464628.6
transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domainSAMN03159453_05545Not AvailableNegative6042786 - 604374834269.8
phenylpyruvate tautomerase ppta, 4-oxalocrotonate tautomerase familySAMN03159453_05546Not AvailablePositive6043845 - 604430316311.6
Trna-metNot AvailableNot AvailablePositive6044369 - 6044445Not Available
amidaseSAMN03159453_05548Not AvailableNegative6044524 - 604598753002.4
spermidine/putrescine transport system substrate-binding proteinSAMN03159453_05549Not AvailableNegative6046048 - 604708237975.7
spermidine/putrescine transport system permease proteinSAMN03159453_05550Not AvailableNegative6047110 - 604791628673.9
spermidine/putrescine transport system permease proteinSAMN03159453_05551Not AvailableNegative6047916 - 604883633294.0
spermidine/putrescine transport system atp-binding proteinSAMN03159453_05552Not AvailableNegative6048852 - 604997040804.2
transcriptional regulator, lysr familySAMN03159453_05553Not AvailablePositive6050210 - 605111533727.6

Displaying genes 5481 – 5490 of 6061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.