Pseudomonas sp. NFIX28

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFIX28 is characterized by having a single replicon. Its genetic information is cataloged under the accession number FNPW00000000.1. The significance of having a single replicon suggests a streamlined genomic structure, which can impact the organism's replication and metabolic processes. This trait may contribute to its adaptability in various environments where Pseudomonas species are commonly found. Pseudomonas species are known for their metabolic versatility, enabling them to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is particularly relevant in bioremediation efforts, where they can degrade pollutants and improve soil health. The genomic data provided by the accession number FNPW00000000.1 can facilitate further research into the specific traits and capabilities of Pseudomonas sp. NFIX28, potentially revealing insights into its ecological roles and applications in biotechnology. Understanding such traits can enhance our knowledge of microbial diversity and the functional roles of microorganisms in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFIX28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFIX28
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFIX28 genome assembly, contig:

Gene Summary

Adenine Count

1266361 bp

Thymine Count

1242748 bp

Guanine Count

2081710 bp

Cytosine Count

2122742 bp

Genome Length

6734225 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putrescine transport system substrate-binding proteinSAMN03159453_00375Not AvailablePositive408265 - 40935940255.2
predicted arabinose efflux permease, mfs familySAMN03159453_00376Not AvailableNegative409411 - 41061341708.6
3-oxoacyl-[acyl-carrier protein] reductaseSAMN03159453_00377Not AvailableNegative410858 - 41162226447.1
glutamate-1-semialdehyde 2,1-aminomutaseSAMN03159453_00378Not AvailableNegative411619 - 41300150729.8
molybdenum cofactor biosynthesis protein fSAMN03159453_00379Not AvailableNegative413392 - 41421930950.4
regulatory protein, luxr familySAMN03159453_00380Not AvailableNegative414313 - 41499025123.5
adenosylmethionine-8-amino-7-oxononanoate aminotransferaseSAMN03159453_00381Not AvailableNegative415242 - 41657348830.6
aldehyde dehydrogenase (acceptor)SAMN03159453_00382Not AvailablePositive416931 - 41841851909.6
amino acid transporterSAMN03159453_00383Not AvailablePositive418638 - 42016754238.8
protein of unknown functionSAMN03159453_00384Not AvailablePositive420133 - 42072622368.0

Displaying genes 511 – 520 of 6061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.