Pseudomonas sp. NFPP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFPP04 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The genomic information for this strain is cataloged under the accession number FOQS00000000.1, which provides a basis for further studies and comparisons with other Pseudomonas species. Pseudomonas species are known for their metabolic diversity, enabling them to thrive in a wide range of ecological niches, including soil, water, and as plant symbionts. The single replicon feature of NFPP04 could suggest a potential for rapid replication and adaptation, which is a common trait among bacteria in dynamic environments. Moreover, Pseudomonas species are often recognized for their role in bioremediation and nutrient cycling within ecosystems. The traits of NFPP04 may support its function in these ecological processes, particularly if it possesses the necessary metabolic pathways to degrade pollutants or contribute to nutrient availability. Understanding the genomic characteristics of Pseudomonas sp. NFPP04 can provide insights into its ecological roles and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFPP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFPP04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFPP04 genome assembly, contig:

Gene Summary

Adenine Count

1208917 bp

Thymine Count

1243632 bp

Guanine Count

1944715 bp

Cytosine Count

1886809 bp

Genome Length

6285678 bp

Protein-coding Genes

5594 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-containing redox enzymeSAMN03159342_03167Not AvailableNegative3528625 - 352945231115.2
levansucraseSAMN03159342_03168Not AvailableNegative3529899 - 353114946259.1
pectin lyaseSAMN03159342_03169Not AvailableNegative3531401 - 353233934245.1
malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenaseSAMN03159342_03170Not AvailableNegative3532583 - 353417558183.9
dna-binding transcriptional regulator, lysr familySAMN03159342_03171Not AvailablePositive3534192 - 353513034249.8
ornithine cyclodeaminaseSAMN03159342_03172Not AvailablePositive3535199 - 353614333731.5
glycine/d-amino acid oxidaseSAMN03159342_03173Not AvailablePositive3536140 - 353727340218.6
predicted transcriptional regulator yheo, contains pas and dna-binding hth domainsSAMN03159342_03174Not AvailablePositive3537273 - 353789923529.2
l-arginine-binding protein /l-ornithine-binding proteinSAMN03159342_03175Not AvailableNegative3538088 - 353886428383.1
acetyl-coa synthetaseSAMN03159342_03176Not AvailablePositive3539127 - 354080962124.1

Displaying genes 3141 – 3150 of 5656 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.