Pseudomonas sp. NFPP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFPP04 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The genomic information for this strain is cataloged under the accession number FOQS00000000.1, which provides a basis for further studies and comparisons with other Pseudomonas species. Pseudomonas species are known for their metabolic diversity, enabling them to thrive in a wide range of ecological niches, including soil, water, and as plant symbionts. The single replicon feature of NFPP04 could suggest a potential for rapid replication and adaptation, which is a common trait among bacteria in dynamic environments. Moreover, Pseudomonas species are often recognized for their role in bioremediation and nutrient cycling within ecosystems. The traits of NFPP04 may support its function in these ecological processes, particularly if it possesses the necessary metabolic pathways to degrade pollutants or contribute to nutrient availability. Understanding the genomic characteristics of Pseudomonas sp. NFPP04 can provide insights into its ecological roles and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFPP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFPP04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFPP04 genome assembly, contig:

Gene Summary

Adenine Count

1208917 bp

Thymine Count

1243632 bp

Guanine Count

1944715 bp

Cytosine Count

1886809 bp

Genome Length

6285678 bp

Protein-coding Genes

5594 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease i subunit dSAMN03159342_02322Not AvailablePositive2556513 - 255775446145.1
exonuclease sbccSAMN03159342_02323Not AvailablePositive2557751 - 2561389136180.0
glutathione s-transferaseSAMN03159342_02324Not AvailablePositive2561386 - 256197922565.3
hypothetical proteinSAMN03159342_02325Not AvailableNegative2562108 - 25622876217.32
6-phosphogluconolactonase, cycloisomerase 2 familySAMN03159342_02326Not AvailableNegative2562444 - 256361942139.8
hypothetical proteinSAMN03159342_02327Not AvailableNegative2563606 - 256389310687.2
hypothetical proteinSAMN03159342_02328Not AvailablePositive2564035 - 2568948182267.0
hypothetical proteinSAMN03159342_02329Not AvailablePositive2569203 - 2574224186418.0
hypothetical proteinSAMN03159342_02330Not AvailableNegative2574271 - 257664687395.3
uncharacterized proteinSAMN03159342_02331Not AvailableNegative2576677 - 257773236983.5

Displaying genes 2301 – 2310 of 5656 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.