Pseudomonas sp. NFACC39-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC39-1 is characterized by having a single replicon, which is critical for its genetic stability and functioning. The organism is associated with the accession FODL00000000.1, indicating its representation in genomic databases and providing a reference for further studies. As a member of the Pseudomonas genus, NFACC39-1 is likely to exhibit traits such as metabolic versatility and resilience in various environments. Pseudomonas species are well-known for their ability to thrive in diverse ecological niches, including soil, water, and plant surfaces, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological implications of Pseudomonas sp. NFACC39-1 are noteworthy, as its metabolic capabilities may contribute to bioremediation processes, where microorganisms degrade environmental pollutants. This ability is particularly important in addressing issues related to soil and water contamination. Moreover, Pseudomonas species can also engage in beneficial interactions with plants, promoting growth and health through mechanisms such as nitrogen fixation and pathogen suppression. In summary, Pseudomonas sp. NFACC39-1, with its single replicon and documented genomic accessions, presents a valuable opportunity for research into its ecological roles and potential applications in environmental biotechnology. Understanding its specific traits could lead to enhanced strategies for bioremediation and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC39-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC39-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC39-1 genome assembly, contig:

Gene Summary

Adenine Count

1196942 bp

Thymine Count

1204019 bp

Guanine Count

1836852 bp

Cytosine Count

1821024 bp

Genome Length

6062622 bp

Protein-coding Genes

5277 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system (t6ss), amidase effector protein 4SAMN03159293_05376Not AvailableNegative5946781 - 594723917407.7
type vi secretion system secreted protein hcpSAMN03159293_05377Not AvailableNegative5947321 - 594780917583.1
type vi secretion system protein impcSAMN03159293_05378Not AvailableNegative5948033 - 594952955673.5
type vi secretion system protein impbSAMN03159293_05379Not AvailableNegative5949545 - 595006018771.6
type vi secretion system protein impaSAMN03159293_05380Not AvailableNegative5950141 - 595117536979.6
fha domain proteinSAMN03159293_05381Not AvailablePositive5951581 - 595305353679.8
type vi secretion system protein vasdSAMN03159293_05382Not AvailablePositive5953104 - 595360418092.6
type vi secretion system protein impjSAMN03159293_05383Not AvailablePositive5953620 - 595495448453.0
type vi secretion system protein impkSAMN03159293_05384Not AvailablePositive5954961 - 595628047832.6
type vi secretion system protein implSAMN03159293_05385Not AvailablePositive5956277 - 5959777128958.0

Displaying genes 5271 – 5280 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.