Pseudomonas sp. NFACC39-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC39-1 is characterized by having a single replicon, which is critical for its genetic stability and functioning. The organism is associated with the accession FODL00000000.1, indicating its representation in genomic databases and providing a reference for further studies. As a member of the Pseudomonas genus, NFACC39-1 is likely to exhibit traits such as metabolic versatility and resilience in various environments. Pseudomonas species are well-known for their ability to thrive in diverse ecological niches, including soil, water, and plant surfaces, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological implications of Pseudomonas sp. NFACC39-1 are noteworthy, as its metabolic capabilities may contribute to bioremediation processes, where microorganisms degrade environmental pollutants. This ability is particularly important in addressing issues related to soil and water contamination. Moreover, Pseudomonas species can also engage in beneficial interactions with plants, promoting growth and health through mechanisms such as nitrogen fixation and pathogen suppression. In summary, Pseudomonas sp. NFACC39-1, with its single replicon and documented genomic accessions, presents a valuable opportunity for research into its ecological roles and potential applications in environmental biotechnology. Understanding its specific traits could lead to enhanced strategies for bioremediation and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC39-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC39-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC39-1 genome assembly, contig:

Gene Summary

Adenine Count

1196942 bp

Thymine Count

1204019 bp

Guanine Count

1836852 bp

Cytosine Count

1821024 bp

Genome Length

6062622 bp

Protein-coding Genes

5277 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-argNot AvailableNot AvailablePositive5890680 - 5890756Not Available
glutarate-semialdehyde dehydrogenaseSAMN03159293_05335Not AvailablePositive5891019 - 589254854723.0
5-aminovalerate transaminaseSAMN03159293_05337Not AvailablePositive5892721 - 589400145092.9
hd-like signal output (hdod) domain, no enzymatic activitySAMN03159293_05338Not AvailablePositive5894141 - 589535544203.8
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN03159293_05339Not AvailableNegative5895484 - 589647337070.9
hypothetical proteinSAMN03159293_05340Not AvailableNegative5896750 - 589710912964.3
hypothetical proteinSAMN03159293_05342Not AvailablePositive5897630 - 589800112918.5
hypothetical proteinSAMN03159293_05343Not AvailableNegative5898339 - 589861710668.0
rhs repeat-associated core domain-containing proteinSAMN03159293_05344Not AvailableNegative5898620 - 5902786155968.0
polyketide cyclase / dehydrase and lipid transportSAMN03159293_05345Not AvailableNegative5902894 - 590335817253.4

Displaying genes 5231 – 5240 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.