Pseudomonas sp. NFACC39-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC39-1 is characterized by having a single replicon, which is critical for its genetic stability and functioning. The organism is associated with the accession FODL00000000.1, indicating its representation in genomic databases and providing a reference for further studies. As a member of the Pseudomonas genus, NFACC39-1 is likely to exhibit traits such as metabolic versatility and resilience in various environments. Pseudomonas species are well-known for their ability to thrive in diverse ecological niches, including soil, water, and plant surfaces, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological implications of Pseudomonas sp. NFACC39-1 are noteworthy, as its metabolic capabilities may contribute to bioremediation processes, where microorganisms degrade environmental pollutants. This ability is particularly important in addressing issues related to soil and water contamination. Moreover, Pseudomonas species can also engage in beneficial interactions with plants, promoting growth and health through mechanisms such as nitrogen fixation and pathogen suppression. In summary, Pseudomonas sp. NFACC39-1, with its single replicon and documented genomic accessions, presents a valuable opportunity for research into its ecological roles and potential applications in environmental biotechnology. Understanding its specific traits could lead to enhanced strategies for bioremediation and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC39-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC39-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC39-1 genome assembly, contig:

Gene Summary

Adenine Count

1196942 bp

Thymine Count

1204019 bp

Guanine Count

1836852 bp

Cytosine Count

1821024 bp

Genome Length

6062622 bp

Protein-coding Genes

5277 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate carboxylase subunit bSAMN03159293_03399Not AvailableNegative3789360 - 379116865609.0
biotin carboxylase /acetyl-coa carboxylase carboxyltransferase subunit alphaSAMN03159293_03400Not AvailableNegative3791181 - 379259651850.2
transcriptional regulator, lysr familySAMN03159293_03401Not AvailablePositive3792785 - 379374735991.0
hypothetical proteinSAMN03159293_03402Not AvailableNegative3793689 - 37938988278.53
transcriptional regulator, rpir familySAMN03159293_03403Not AvailableNegative3794130 - 379499631065.8
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN03159293_03404Not AvailableNegative3795137 - 3798010107178.0
atp-dependent dna helicase uvrdSAMN03159293_03405Not AvailablePositive3798272 - 380045581303.7
predicted lipid-binding transport protein, tim44 familySAMN03159293_03406Not AvailablePositive3800768 - 380164331022.9
smi1-knr4 cell-wallSAMN03159293_03407Not AvailablePositive3801782 - 380218915566.0
transporter, cpa2 familySAMN03159293_03408Not AvailableNegative3802212 - 380397564144.4

Displaying genes 3381 – 3390 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.