Pseudomonas sp. NFACC39-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC39-1 is characterized by having a single replicon, which is critical for its genetic stability and functioning. The organism is associated with the accession FODL00000000.1, indicating its representation in genomic databases and providing a reference for further studies. As a member of the Pseudomonas genus, NFACC39-1 is likely to exhibit traits such as metabolic versatility and resilience in various environments. Pseudomonas species are well-known for their ability to thrive in diverse ecological niches, including soil, water, and plant surfaces, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological implications of Pseudomonas sp. NFACC39-1 are noteworthy, as its metabolic capabilities may contribute to bioremediation processes, where microorganisms degrade environmental pollutants. This ability is particularly important in addressing issues related to soil and water contamination. Moreover, Pseudomonas species can also engage in beneficial interactions with plants, promoting growth and health through mechanisms such as nitrogen fixation and pathogen suppression. In summary, Pseudomonas sp. NFACC39-1, with its single replicon and documented genomic accessions, presents a valuable opportunity for research into its ecological roles and potential applications in environmental biotechnology. Understanding its specific traits could lead to enhanced strategies for bioremediation and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC39-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC39-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC39-1 genome assembly, contig:

Gene Summary

Adenine Count

1196942 bp

Thymine Count

1204019 bp

Guanine Count

1836852 bp

Cytosine Count

1821024 bp

Genome Length

6062622 bp

Protein-coding Genes

5277 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
unsaturated chondroitin disaccharide hydrolaseSAMN03159293_02440Not AvailablePositive2696840 - 269792239512.7
uncharacterized conserved protein, circularly permuted atpgrasp superfamilySAMN03159293_02441Not AvailablePositive2698412 - 269982152534.0
uncharacterized conserved protein, alpha-e superfamilySAMN03159293_02442Not AvailablePositive2699825 - 270077535972.5
transglutaminase-like enzyme, putative cysteine proteaseSAMN03159293_02443Not AvailablePositive2700772 - 270156929456.9
hypothetical proteinSAMN03159293_02444Not AvailablePositive2701899 - 270239318136.6
protein of unknown functionSAMN03159293_02445Not AvailablePositive2702515 - 270318623567.4
thiol peroxidase (atypical 2-cys peroxiredoxin)SAMN03159293_02446Not AvailablePositive2703392 - 270389217484.8
membrane fusion protein, multidrug efflux systemSAMN03159293_02447Not AvailablePositive2704084 - 270540046813.7
multidrug efflux pumpSAMN03159293_02448Not AvailablePositive2705397 - 2708492111141.0
hypothetical proteinSAMN03159293_02449Not AvailablePositive2708489 - 27086927040.19

Displaying genes 2431 – 2440 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.