Pseudomonas sp. NFACC39-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC39-1 is characterized by having a single replicon, which is critical for its genetic stability and functioning. The organism is associated with the accession FODL00000000.1, indicating its representation in genomic databases and providing a reference for further studies. As a member of the Pseudomonas genus, NFACC39-1 is likely to exhibit traits such as metabolic versatility and resilience in various environments. Pseudomonas species are well-known for their ability to thrive in diverse ecological niches, including soil, water, and plant surfaces, where they play significant roles in nutrient cycling and organic matter decomposition. The ecological implications of Pseudomonas sp. NFACC39-1 are noteworthy, as its metabolic capabilities may contribute to bioremediation processes, where microorganisms degrade environmental pollutants. This ability is particularly important in addressing issues related to soil and water contamination. Moreover, Pseudomonas species can also engage in beneficial interactions with plants, promoting growth and health through mechanisms such as nitrogen fixation and pathogen suppression. In summary, Pseudomonas sp. NFACC39-1, with its single replicon and documented genomic accessions, presents a valuable opportunity for research into its ecological roles and potential applications in environmental biotechnology. Understanding its specific traits could lead to enhanced strategies for bioremediation and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC39-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC39-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC39-1 genome assembly, contig:

Gene Summary

Adenine Count

1196942 bp

Thymine Count

1204019 bp

Guanine Count

1836852 bp

Cytosine Count

1821024 bp

Genome Length

6062622 bp

Protein-coding Genes

5277 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isoquinoline 1-oxidoreductase, beta subunitSAMN03159293_01717Not AvailableNegative1909279 - 191141476491.2
isoquinoline 1-oxidoreductase, alpha subunitSAMN03159293_01718Not AvailableNegative1911457 - 191191216119.5
hydroxymethylglutaryl-coa lyaseSAMN03159293_01719Not AvailableNegative1912198 - 191311232488.3
crotonobetainyl-coa:carnitine coa-transferase caibSAMN03159293_01720Not AvailableNegative1913173 - 191437543291.2
dna-binding transcriptional regulator, lysr familySAMN03159293_01721Not AvailablePositive1914558 - 191547834274.6
c4-dicarboxylate-binding protein dctpSAMN03159293_01722Not AvailablePositive1915598 - 191660537079.4
lysr family transcriptional regulator, transcriptional activator for dmlaSAMN03159293_01723Not AvailablePositive1916724 - 191766535663.1
3-isopropylmalate dehydratase, small subunitSAMN03159293_01724Not AvailableNegative1917724 - 191833222359.8
3-isopropylmalate dehydratase, large subunitSAMN03159293_01725Not AvailableNegative1918334 - 191975551303.3
gst-like proteinSAMN03159293_01726Not AvailableNegative1919984 - 192082331349.1

Displaying genes 1721 – 1730 of 5372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.