Pseudomonas sp. NFACC23-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC23-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This bacterium is cataloged under the accession number FNZL00000000.1, which serves as a unique identifier for its genomic data. The single replicon trait is significant as it can influence the organism's replication and stability of its genetic material. In general, Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant-associated environments. This adaptability is often linked to their capacity for utilizing a wide range of carbon sources and their ability to degrade various pollutants, making them important in bioremediation efforts. The genomic characteristics of Pseudomonas sp. NFACC23-1, particularly its single replicon, may enhance its efficiency in gene regulation and expression, which can be advantageous for survival under fluctuating environmental conditions. This trait could also facilitate rapid responses to environmental stressors, allowing the bacterium to maintain its ecological roles, such as nutrient cycling and plant interactions. In summary, the defining trait of a single replicon in Pseudomonas sp. NFACC23-1 highlights its potential adaptability and ecological significance, suggesting a role in various biogeochemical processes within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC23-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC23-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC23-1 genome assembly, contig:

Gene Summary

Adenine Count

1310669 bp

Thymine Count

1294631 bp

Guanine Count

1994779 bp

Cytosine Count

2016886 bp

Genome Length

6621749 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN03159382_05686Not AvailablePositive6226762 - 622893981965.2
hypothetical proteinSAMN03159382_05687Not AvailableNegative6229176 - 622948111170.3
l-leucine-binding protein /l-isoleucine-binding protein /l-valine-binding proteinSAMN03159382_05688Not AvailablePositive6229820 - 623094739719.3
l-leucine abc transporter membrane protein /l-isoleucine abc transporter membrane protein /l-valine abc transporter membrane proteinSAMN03159382_05689Not AvailablePositive6231178 - 623210132334.6
l-leucine abc transporter membrane protein /l-isoleucine abc transporter membrane protein /l-valine abc transporter membrane proteinSAMN03159382_05690Not AvailablePositive6232098 - 623335445746.9
l-leucine abc transporter atp-binding protein /l-isoleucine abc transporter atp-binding protein /l-valine abc transporter atp-binding proteinSAMN03159382_05691Not AvailablePositive6233351 - 623411828346.6
l-leucine abc transporter atp-binding protein /l-isoleucine abc transporter atp-binding protein /l-valine abc transporter atp-binding proteinSAMN03159382_05692Not AvailablePositive6234119 - 623482025643.3
insertion element 4 transposase n-terminalSAMN03159382_05693Not AvailablePositive6234938 - 623520610001.6
crotonobetainyl-coa:carnitine coa-transferase caibSAMN03159382_05694Not AvailableNegative6235773 - 623699343426.0
glutaryl-coa dehydrogenaseSAMN03159382_05695Not AvailableNegative6237007 - 623818843170.9

Displaying genes 5571 – 5580 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.