Pseudomonas sp. NFACC23-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC23-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This bacterium is cataloged under the accession number FNZL00000000.1, which serves as a unique identifier for its genomic data. The single replicon trait is significant as it can influence the organism's replication and stability of its genetic material. In general, Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant-associated environments. This adaptability is often linked to their capacity for utilizing a wide range of carbon sources and their ability to degrade various pollutants, making them important in bioremediation efforts. The genomic characteristics of Pseudomonas sp. NFACC23-1, particularly its single replicon, may enhance its efficiency in gene regulation and expression, which can be advantageous for survival under fluctuating environmental conditions. This trait could also facilitate rapid responses to environmental stressors, allowing the bacterium to maintain its ecological roles, such as nutrient cycling and plant interactions. In summary, the defining trait of a single replicon in Pseudomonas sp. NFACC23-1 highlights its potential adaptability and ecological significance, suggesting a role in various biogeochemical processes within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC23-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC23-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC23-1 genome assembly, contig:

Gene Summary

Adenine Count

1310669 bp

Thymine Count

1294631 bp

Guanine Count

1994779 bp

Cytosine Count

2016886 bp

Genome Length

6621749 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma-70 factor, ecf subfamilySAMN03159382_05230Not AvailablePositive5758323 - 575892222801.9
hypothetical proteinSAMN03159382_05231Not AvailablePositive5758919 - 575953622259.9
hypothetical proteinSAMN03159382_05232Not AvailablePositive5759679 - 576039226399.8
predicted nucleic acid-binding protein, contains pin domainSAMN03159382_05233Not AvailablePositive5760394 - 576091818835.6
Trna-argNot AvailableNot AvailablePositive5760997 - 5761073Not Available
glutarate-semialdehyde dehydrogenase /succinate semialdehyde dehydrogenaseSAMN03159382_05235Not AvailablePositive5761336 - 576286554695.9
5-aminovalerate transaminaseSAMN03159382_05237Not AvailablePositive5763039 - 576431644861.6
hd-like signal output (hdod) domain, no enzymatic activitySAMN03159382_05238Not AvailablePositive5764455 - 576567244366.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN03159382_05239Not AvailableNegative5765954 - 576694337246.4
fatty-acid desaturaseSAMN03159382_05240Not AvailableNegative5767272 - 576845645419.2

Displaying genes 5121 – 5130 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.