Pseudomonas sp. NFACC23-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC23-1 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This bacterium is cataloged under the accession number FNZL00000000.1, which serves as a unique identifier for its genomic data. The single replicon trait is significant as it can influence the organism's replication and stability of its genetic material. In general, Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant-associated environments. This adaptability is often linked to their capacity for utilizing a wide range of carbon sources and their ability to degrade various pollutants, making them important in bioremediation efforts. The genomic characteristics of Pseudomonas sp. NFACC23-1, particularly its single replicon, may enhance its efficiency in gene regulation and expression, which can be advantageous for survival under fluctuating environmental conditions. This trait could also facilitate rapid responses to environmental stressors, allowing the bacterium to maintain its ecological roles, such as nutrient cycling and plant interactions. In summary, the defining trait of a single replicon in Pseudomonas sp. NFACC23-1 highlights its potential adaptability and ecological significance, suggesting a role in various biogeochemical processes within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC23-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC23-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC23-1 genome assembly, contig:

Gene Summary

Adenine Count

1310669 bp

Thymine Count

1294631 bp

Guanine Count

1994779 bp

Cytosine Count

2016886 bp

Genome Length

6621749 bp

Protein-coding Genes

5791 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protease iSAMN03159382_04973Not AvailableNegative5472438 - 547297719217.8
hd-like signal output (hdod) domain, no enzymatic activitySAMN03159382_04974Not AvailablePositive5473156 - 547402532237.3
dna-(apurinic or apyrimidinic site) lyase /formamidopyrimidine-dna glycosylaseSAMN03159382_04975Not AvailablePositive5474056 - 547486830203.9
hypothetical proteinSAMN03159382_04976Not AvailablePositive5474921 - 547524110774.5
4fe-4s dicluster domain-containing proteinSAMN03159382_04977Not AvailableNegative5475403 - 54756549316.97
phosphopantetheine adenylyltransferaseSAMN03159382_04978Not AvailableNegative5475792 - 547627117806.6
choline dehydrogenaseSAMN03159382_04979Not AvailableNegative5476523 - 547811857383.7
hypothetical proteinSAMN03159382_04980Not AvailableNegative5478203 - 547874819209.0
coniferyl-aldehyde dehydrogenaseSAMN03159382_04981Not AvailableNegative5478776 - 548020652646.8
transcriptional regulator, tetr familySAMN03159382_04982Not AvailablePositive5480367 - 548102625424.3

Displaying genes 4871 – 4880 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.