Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0877 | Not Available | Positive | 987451 - 987945 | 18892.4 |
| hypothetical protein | HHT355_0878 | Not Available | Positive | 987993 - 988265 | 10306.5 |
| putative secreted protein | HHT355_0879 | Not Available | Negative | 988369 - 989061 | 25724.9 |
| hypothetical protein | HHT355_0880 | Not Available | Positive | 989420 - 990481 | 41391.7 |
| hypothetical protein | HHT355_0881 | Not Available | Positive | 990554 - 992293 | 65358.4 |
| hypothetical protein | HHT355_0882 | Not Available | Negative | 992534 - 993838 | 50370.8 |
| hypothetical protein | HHT355_0883 | Not Available | Positive | 994142 - 994753 | 24631.7 |
| putative membrane protein | HHT355_0884 | Not Available | Positive | 994958 - 996691 | 64114.0 |
| putative membrane protein | HHT355_0885 | Not Available | Positive | 996693 - 998594 | 70526.2 |
| putative membrane protein | HHT355_0886 | Not Available | Positive | 999021 - 1000052 | 38780.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
