Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0847 | Not Available | Positive | 953109 - 954746 | 63441.9 |
| hypothetical protein | HHT355_0848 | Not Available | Negative | 954911 - 955699 | 29971.3 |
| hypothetical protein | HHT355_0849 | Not Available | Negative | 956067 - 957620 | 59349.6 |
| hypothetical protein | HHT355_0850 | Not Available | Negative | 957601 - 959139 | 59608.5 |
| putative transketolase n-terminal section | HHT355_0851 | Not Available | Positive | 959232 - 960044 | 29226.2 |
| putative transketolase c-terminal section | HHT355_0852 | Not Available | Positive | 960046 - 961035 | 35908.5 |
| hypothetical protein | HHT355_0853 | Not Available | Negative | 961128 - 962447 | 50887.3 |
| hypothetical protein | HHT355_0854 | Not Available | Negative | 963222 - 963413 | 7255.54 |
| hypothetical protein | HHT355_0855 | Not Available | Positive | 963503 - 964660 | 42758.0 |
| hypothetical protein | HHT355_0856 | Not Available | Positive | 965026 - 965961 | 35670.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
