Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0837 | Not Available | Positive | 942899 - 943270 | 13944.9 |
| hypothetical protein | HHT355_0838 | Not Available | Positive | 943525 - 943893 | 14815.7 |
| hypothetical protein | HHT355_0839 | Not Available | Positive | 943958 - 944368 | 14942.1 |
| putative membrane protein | HHT355_0840 | Not Available | Negative | 944404 - 944967 | 20242.8 |
| putative membrane protein | HHT355_0841 | Not Available | Negative | 944964 - 945542 | 20770.1 |
| hypothetical protein | HHT355_0842 | Not Available | Positive | 946113 - 946958 | 30695.4 |
| hypothetical protein | HHT355_0843 | Not Available | Positive | 947670 - 948224 | 20123.2 |
| hypothetical protein | HHT355_0844 | Not Available | Positive | 948280 - 950079 | 69026.5 |
| alpha-n-arabinofuranosidase 2 | HHT355_0845 | Not Available | Positive | 950169 - 951638 | 55590.9 |
| exodeoxyribonuclease | HHT355_0846 | Not Available | Positive | 951979 - 952809 | 31593.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
