Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 7594 - 7668 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 7745 - 7815 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 7860 - 7933 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 7979 - 8052 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 8057 - 8128 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 8268 - 8340 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 8357 - 8436 | Not Available |
| rubrerythrin-2 | HHT355_0016 | Not Available | Negative | 8649 - 9203 | 20604.4 |
| hypothetical protein | HHT355_0017 | Not Available | Negative | 9230 - 10078 | 31034.1 |
| hypothetical protein | HHT355_0018 | Not Available | Negative | 10071 - 11741 | 60909.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
