Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 1968595 - 1968606 | Not Available |
| Site-specific recombinase for integration and excision | HHT355_1761 | Not Available | Positive | 1968932 - 1970518 | 60185.8 |
| hypothetical protein | HHT355_0001 | Not Available | Positive | 459 - 932 | 18760.7 |
| hypothetical protein | HHT355_0002 | Not Available | Positive | 1291 - 1584 | 10709.5 |
| hypothetical protein | HHT355_0003 | Not Available | Positive | 1779 - 2093 | 11743.5 |
| putative rna methyltransferase ypsc | HHT355_0004 | Not Available | Positive | 2171 - 3340 | 44655.9 |
| hypothetical protein | HHT355_0005 | Not Available | Negative | 3605 - 4525 | 34803.2 |
| hypothetical protein | HHT355_0006 | Not Available | Positive | 4931 - 6196 | 47956.6 |
| hypothetical protein | HHT355_0007 | Not Available | Positive | 6243 - 6881 | 23764.2 |
| hypothetical protein | HHT355_0008 | Not Available | Positive | 6859 - 7344 | 17996.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
