Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease j 1 | HHT355_0616 | Not Available | Positive | 703817 - 705658 | 67495.0 |
| putative membrane protein | HHT355_0617 | Not Available | Positive | 705728 - 706150 | 16150.6 |
| hypothetical protein | HHT355_0618 | Not Available | Positive | 706185 - 706844 | 25270.1 |
| putative protease yrro | HHT355_0619 | Not Available | Positive | 707107 - 708354 | 47863.1 |
| rna polymerase sigma-28 factor | HHT355_0620 | Not Available | Positive | 708496 - 709116 | 23855.0 |
| putative membrane protein | HHT355_0621 | Not Available | Positive | 709436 - 709849 | 15696.7 |
| hypothetical protein | HHT355_0622 | Not Available | Positive | 710039 - 711436 | 52437.5 |
| hypothetical protein | HHT355_0623 | Not Available | Negative | 711487 - 712509 | 38440.3 |
| hypothetical protein | HHT355_0624 | Not Available | Positive | 712648 - 713793 | 43149.6 |
| hypothetical protein | HHT355_0625 | Not Available | Positive | 713886 - 715259 | 50070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
