Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HHT355_1751 | Not Available | Negative | 1964021 - 1965178 | 43467.1 |
| Hypothetical protein | HHT355_1752 | Not Available | Negative | 1965178 - 1965528 | 12626.2 |
| Hypothetical protein | HHT355_1753 | Not Available | Negative | 1965529 - 1965744 | 8434.02 |
| hypothetical protein | HHT355_1754 | Not Available | Negative | 1965749 - 1965982 | 8933.7 |
| Transcription state regulatory protein abrb | HHT355_1755 | Not Available | Negative | 1965985 - 1966251 | 10070.5 |
| hypothetical protein | HHT355_1756 | Not Available | Negative | 1966332 - 1966643 | 12091.7 |
| hypothetical protein | HHT355_1757 | Not Available | Negative | 1966882 - 1967040 | 6015.43 |
| Transcriptional repressor | HHT355_1758 | Not Available | Negative | 1967145 - 1967339 | 7240.91 |
| Putative repressor protein | HHT355_1759 | Not Available | Positive | 1967541 - 1967870 | 12141.9 |
| Ribosomal protein | HHT355_1760 | Not Available | Positive | 1967867 - 1968916 | 40437.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
