Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0596 | Not Available | Positive | 685481 - 685603 | 4815.25 |
| hypothetical protein | HHT355_0597 | Not Available | Positive | 685620 - 686324 | 27414.1 |
| Trna-leu | Not Available | Not Available | Positive | 686677 - 686759 | Not Available |
| hypothetical protein | HHT355_0599 | Not Available | Positive | 686867 - 687343 | 19115.9 |
| dna polymerase i | HHT355_0600 | Not Available | Positive | 687379 - 690045 | 101040.0 |
| hypothetical protein | HHT355_0601 | Not Available | Positive | 690070 - 690663 | 22395.9 |
| hypothetical protein | HHT355_0602 | Not Available | Positive | 690771 - 691562 | 29106.1 |
| hypothetical protein | HHT355_0603 | Not Available | Positive | 691660 - 691932 | 10258.7 |
| upf0210 protein | HHT355_0604 | Not Available | Positive | 691949 - 693313 | 47536.1 |
| hypothetical protein | HHT355_0605 | Not Available | Positive | 693461 - 694921 | 54930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
