Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0566 | Not Available | Positive | 651738 - 652382 | 25018.3 |
| putative membrane protein | HHT355_0567 | Not Available | Negative | 652379 - 653362 | 36302.9 |
| oligoendopeptidase f homolog | HHT355_0568 | Not Available | Positive | 653463 - 655271 | 69600.9 |
| hypothetical protein | HHT355_0569 | Not Available | Positive | 655586 - 655747 | 5697.09 |
| hypothetical protein | HHT355_0570 | Not Available | Positive | 655872 - 656309 | 16322.6 |
| hypothetical protein | HHT355_0571 | Not Available | Negative | 656504 - 657799 | 48882.0 |
| phosphate acetyltransferase | HHT355_0572 | Not Available | Positive | 658138 - 659136 | 35326.5 |
| acetate kinase | HHT355_0573 | Not Available | Positive | 659155 - 660354 | 43456.6 |
| hypothetical protein | HHT355_0574 | Not Available | Positive | 660449 - 660976 | 19887.9 |
| hypothetical protein | HHT355_0575 | Not Available | Positive | 660979 - 661158 | 6767.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
