Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0477 | Not Available | Positive | 541631 - 542452 | 29765.2 |
| hypothetical protein | HHT355_0478 | Not Available | Positive | 542758 - 543144 | 13567.3 |
| hypothetical protein | HHT355_0479 | Not Available | Positive | 543251 - 543646 | 15307.6 |
| exodeoxyribonuclease 7 large subunit | HHT355_0480 | Not Available | Positive | 543666 - 544871 | 45638.6 |
| hypothetical protein | HHT355_0481 | Not Available | Positive | 544926 - 545135 | 7951.42 |
| hypothetical protein | HHT355_0482 | Not Available | Positive | 545125 - 546039 | 34178.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HHT355_0483 | Not Available | Positive | 546108 - 547982 | 69193.7 |
| putative rrna methyltransferase yqxc | HHT355_0484 | Not Available | Positive | 548021 - 548848 | 30488.0 |
| putative inorganic polyphosphate/atp-nad kinase | HHT355_0485 | Not Available | Positive | 548988 - 549851 | 31894.5 |
| hypothetical protein | HHT355_0486 | Not Available | Positive | 549882 - 550340 | 16989.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
