Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | HHT355_0467 | Not Available | Positive | 534001 - 534558 | 20738.7 |
| putative membrane protein | HHT355_0468 | Not Available | Negative | 534614 - 535669 | 41515.5 |
| hypothetical protein | HHT355_0469 | Not Available | Negative | 535885 - 536661 | 28777.8 |
| hypothetical protein | HHT355_0470 | Not Available | Positive | 536935 - 537888 | 35580.8 |
| hypothetical protein | HHT355_0471 | Not Available | Positive | 537918 - 538439 | 19924.6 |
| putative membrane protein | HHT355_0472 | Not Available | Positive | 538529 - 538726 | 7489.65 |
| putative membrane protein | HHT355_0473 | Not Available | Positive | 538756 - 539142 | 14064.9 |
| putative secreted protein | HHT355_0474 | Not Available | Positive | 539172 - 540365 | 43204.2 |
| hypothetical protein | HHT355_0475 | Not Available | Positive | 540389 - 541012 | 24135.3 |
| putative membrane protein | HHT355_0476 | Not Available | Positive | 541014 - 541616 | 22216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
